C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MAM domain containing glycosylphosphatidylinositol anchor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165211 Mdga1-006 ENSMUSG00000043557 10090 - 17:29849683-29887482 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryENSMUST00000165211
Transcript ID Kidney Liver Ovary
ENSMUST00000165211 0.263±0.03 0.140±0.05 1.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D2 CIL_0005D2_0002 CGP 17:29689378-29970087
CIL_0004LC CIL_0004LC_0003 CGP 17:29827956-30210019

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0003674 ND molecular_function
GO:0021799 IMP cerebral cortex radially oriented cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000434837 MDGA1-001 protein_coding Homo_sapiens 0 771
ENST00000478143 MDGA1-002 retained_intron Homo_sapiens 3e-32 145
ENST00000505425 MDGA1-003 protein_coding Homo_sapiens 0 771

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