C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005D2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198937-ENSG00000112139 CGP 9606 6:37482920-37699306
GeneTranscriptPositionBiotype
ENSG00000112139 (MDGA1)
MAM domain containing glycosylphosphatidylinositol anchor 1 		ENST00000373401 (MDGA1-005) 37633737-37639824 retained_intron
ENST00000418178 (MDGA1-012) 37638655-37646374 protein_coding
ENST00000434837 (MDGA1-001) 37630679-37697990 protein_coding
ENST00000478143 (MDGA1-002) 37649871-37663989 retained_intron
ENST00000502298 (MDGA1-010) 37643278-37647272 nonsense_mediated_decay
ENST00000503419 (MDGA1-011) 37638628-37641897 processed_transcript
ENST00000505425 (MDGA1-003) 37637960-37696811 protein_coding
ENST00000508399 (MDGA1-008) 37655880-37664316 protein_coding
ENST00000510077 (MDGA1-009) 37646303-37648630 processed_transcript
ENST00000515437 (MDGA1-007) 37655723-37699306 protein_coding
ENSG00000198937 (CCDC167)
coiled-coil domain containing 167 		ENST00000373408 (CCDC167-001) 37482920-37499922 protein_coding
ENSG00000204110 (RP1-153P14.8)
 ENST00000570443 (RP1-153P14.8-002) 37507348-37535616 lincRNA
ENSG00000227920 (RP1-153P14.5)
 ENST00000414875 (RP1-153P14.5-001) 37545145-37550860 lincRNA
ENSG00000279942 (RP1-153P14.7)
 ENST00000624365 (RP1-153P14.7-001) 37567716-37571460 TEC
CIL_0005D2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024018-ENSMUSG00000043557 CGP 10090 17:29689378-29970087
GeneTranscriptPositionBiotype
ENSMUSG00000024018 (Ccdc167)
coiled-coil domain containing 167 		ENSMUST00000123502 (Ccdc167-002) 29697575-29716985 nonsense_mediated_decay
ENSMUST00000128751 (Ccdc167-003) 29703332-29717012 protein_coding
ENSMUST00000129091 (Ccdc167-001) 29698321-29717009 protein_coding
ENSMUST00000131807 (Ccdc167-005) 29699999-29716963 nonsense_mediated_decay
ENSMUST00000137079 (Ccdc167-004) 29689378-29717009 nonsense_mediated_decay
ENSMUST00000174437 (Ccdc167-006) 29712973-29716964 processed_transcript
ENSMUSG00000024019 (Cmtr1)
cap methyltransferase 1 		ENSMUST00000024816 (Cmtr1-001) 29660595-29705979 protein_coding
ENSMUST00000127695 (Cmtr1-008) 29681176-29685928 processed_transcript
ENSMUST00000128410 (Cmtr1-005) 29678879-29690407 retained_intron
ENSMUST00000129864 (Cmtr1-006) 29679261-29682165 protein_coding
ENSMUST00000130052 (Cmtr1-007) 29680446-29689991 processed_transcript
ENSMUST00000130423 (Cmtr1-004) 29660807-29674290 protein_coding
ENSMUST00000138939 (Cmtr1-002) 29687056-29703359 retained_intron
ENSMUST00000172516 (Cmtr1-011) 29682149-29690095 retained_intron
ENSMUST00000172610 (Cmtr1-010) 29685795-29690077 retained_intron
ENSMUSG00000043557 (Mdga1)
MAM domain containing glycosylphosphatidylinositol anchor 1 		ENSMUST00000073556 (Mdga1-201) 29827958-29887882 protein_coding
ENSMUST00000165211 (Mdga1-006) 29849683-29887482 protein_coding
ENSMUST00000165528 (Mdga1-004) 29832056-29842421 retained_intron
ENSMUST00000167102 (Mdga1-005) 29850562-29889950 processed_transcript
ENSMUST00000167190 (Mdga1-003) 29842119-29970087 protein_coding
ENSMUST00000168044 (Mdga1-007) 29832283-29839910 protein_coding
ENSMUST00000170786 (Mdga1-008) 29832266-29835358 processed_transcript
ENSMUST00000171691 (Mdga1-001) 29827956-29888629 protein_coding
ENSMUSG00000086534 (Gm16758)
predicted gene, 16758 		ENSMUST00000149552 (Gm16758-001) 29890084-29897067 processed_transcript
ENSMUSG00000098374 (Gm28043)
predicted gene, 28043 		ENSMUST00000130871 (Gm28043-001) 29614876-29703359 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005D2_0001ENSG00000112139ENST00000373401ENST00000418178ENST00000434837ENST00000478143ENST00000502298ENST00000503419ENST00000505425ENST00000508399ENST00000510077ENST00000515437ENSG00000198937ENST00000373408ENSG00000204110ENST00000570443ENSG00000227920ENST00000414875ENSG00000279942ENST00000624365CIL_0005D2_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005D2_0001ENSG00000112139ENST00000373401ENST00000418178ENST00000434837ENST00000478143ENST00000502298ENST00000505425ENSG00000198937ENST00000373408ENSG00000204110ENST00000570443ENSG00000227920ENST00000414875ENSG00000279942ENST00000624365CIL_0005D2_0002ENSMUSG00000024018ENSMUST00000123502ENSMUST00000128751ENSMUSG00000024019ENSMUST00000024816ENSMUST00000128410ENSMUST00000138939ENSMUSG00000043557ENSMUST00000073556ENSMUST00000165211ENSMUST00000165528ENSMUST00000167102ENSMUST00000167190ENSMUST00000168044ENSMUST00000170786ENSMUST00000171691ENSMUSG00000086534ENSMUST00000149552ENSMUSG00000098374ENSMUST00000130871
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112139 ENST00000373401 0.119±0.00 N/A N/A N/A N/A 0.045±0.00 0.106±0.00 N/A N/A 0.192±0.00 N/A 0.306±0.08 0.039±0.00 0.236±0.00
ENST00000418178 N/A N/A 2.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434837 0.141±0.00 0.323±0.00 0.022±0.00 0.517±0.34 0.193±0.02 0.625±0.00 0.073±0.00 0.096±0.00 N/A 0.192±0.00 N/A 0.496±0.52 0.063±0.01 0.320±0.22
ENST00000478143 N/A N/A 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502298 N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A
ENST00000503419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505425 N/A 0.534±0.00 N/A 0.255±0.00 0.255±0.01 0.425±0.33 0.260±0.17 0.322±0.00 N/A 0.460±0.14 0.245±0.01 1.644±0.99 0.263±0.07 0.612±0.00
ENST00000508399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198937 ENST00000373408 8.767±0.00 17.814±0.00 0.519±0.00 6.243±3.05 4.900±3.92 8.260±6.94 7.087±0.00 8.474±6.17 28.817±0.00 4.060±3.97 1.731±0.85 12.181±7.01 14.873±3.44 27.197±11.94
ENSG00000204110 ENST00000570443 N/A 0.049±0.00 N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000227920 ENST00000414875 N/A 0.152±0.00 N/A 0.022±0.00 N/A N/A N/A N/A N/A 0.187±0.00 N/A 0.035±0.00 N/A 0.034±0.00
ENSG00000279942 ENST00000624365 N/A 0.100±0.00 N/A 0.005±0.00 0.028±0.01 N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024018 ENSMUST00000123502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.976±0.09 N/A N/A
ENSMUST00000128751 N/A N/A N/A N/A N/A N/A N/A N/A 16.160±0.00 N/A N/A N/A N/A N/A
ENSMUST00000129091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024019 ENSMUST00000024816 5.495±1.12 7.056±1.82 7.980±0.85 8.851±0.29 6.160±0.80 5.786±0.66 3.705±0.44 4.303±0.93 5.462±0.91 5.501±0.84 2.990±0.87 8.665±2.20 5.544±1.56 5.019±0.74
ENSMUST00000127695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.565±0.00 N/A
ENSMUST00000129864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138939 14.192±2.54 16.049±1.26 8.740±0.00 12.301±0.00 20.721±5.43 9.285±0.00 11.791±0.37 10.693±1.94 12.054±1.56 12.796±1.38 4.811±0.37 14.071±2.88 13.805±6.86 11.402±0.25
ENSMUST00000172516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043557 ENSMUST00000073556 0.042±0.00 0.075±0.00 0.503±0.00 4.797±0.00 0.052±0.00 N/A N/A 0.025±0.01 0.083±0.08 0.086±0.01 N/A 0.137±0.06 0.032±0.01 0.103±0.04
ENSMUST00000165211 N/A N/A N/A N/A N/A N/A N/A 0.263±0.03 0.140±0.05 N/A N/A 1.013±0.00 N/A N/A
ENSMUST00000165528 0.702±0.04 0.568±0.16 1.293±0.15 N/A 1.372±0.46 1.083±0.26 6.882±0.85 0.157±0.07 0.779±0.62 1.107±0.09 1.774±0.56 0.696±0.31 0.180±0.02 N/A
ENSMUST00000167102 N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A 0.453±0.00 0.275±0.10 N/A
ENSMUST00000167190 0.109±0.03 0.142±0.03 N/A N/A 1.218±0.09 0.250±0.03 N/A 0.063±0.04 0.224±0.22 N/A 0.875±0.16 0.262±0.12 0.109±0.03 N/A
ENSMUST00000168044 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 0.080±0.00 N/A N/A 0.141±0.00 0.218±0.00 N/A
ENSMUST00000170786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.03 N/A N/A
ENSMUST00000171691 0.084±0.00 0.127±0.05 0.549±0.14 4.050±2.59 0.179±0.18 0.142±0.07 0.604±0.00 0.024±0.02 0.268±0.14 0.083±0.04 1.189±0.48 0.171±0.09 0.066±0.00 N/A
ENSMUSG00000086534 ENSMUST00000149552 0.007±0.00 0.025±0.01 0.071±0.02 0.053±0.00 0.047±0.02 0.022±0.01 0.007±0.00 0.010±0.00 0.040±0.02 0.010±0.00 0.189±0.06 0.040±0.02 0.007±0.00 0.027±0.02
ENSMUSG00000098374 ENSMUST00000130871 N/A N/A 6.924±0.92 6.542±0.33 N/A N/A N/A N/A 5.497±0.87 N/A 2.951±0.47 7.468±0.97 6.991±1.97 N/A

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