C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074376-ENSDARG00000052833 CGP 7955 13:44927557-45378697
GeneTranscriptPositionBiotype
ENSDARG00000052833 (zfand3)
zinc finger, AN1-type domain 3 		ENSDART00000074761 (zfand3-001) 45321793-45358171 protein_coding
ENSDART00000141228 (zfand3-002) 45334877-45378697 processed_transcript
ENSDARG00000074376 (MDGA1)
MAM domain containing glycosylphosphatidylinositol anchor 1 		ENSDART00000110092 (MDGA1-201) 44927557-45245015 protein_coding
CIL_0004LC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112139-ENSG00000156639 CGP 9606 6:37630679-38154624
GeneTranscriptPositionBiotype
ENSG00000112139 (MDGA1)
MAM domain containing glycosylphosphatidylinositol anchor 1 		ENST00000373401 (MDGA1-005) 37633737-37639824 retained_intron
ENST00000418178 (MDGA1-012) 37638655-37646374 protein_coding
ENST00000434837 (MDGA1-001) 37630679-37697990 protein_coding
ENST00000478143 (MDGA1-002) 37649871-37663989 retained_intron
ENST00000502298 (MDGA1-010) 37643278-37647272 nonsense_mediated_decay
ENST00000503419 (MDGA1-011) 37638628-37641897 processed_transcript
ENST00000505425 (MDGA1-003) 37637960-37696811 protein_coding
ENST00000508399 (MDGA1-008) 37655880-37664316 protein_coding
ENST00000510077 (MDGA1-009) 37646303-37648630 processed_transcript
ENST00000515437 (MDGA1-007) 37655723-37699306 protein_coding
ENSG00000156639 (ZFAND3)
zinc finger, AN1-type domain 3 		ENST00000287218 (ZFAND3-001) 37819499-38154624 protein_coding
ENST00000373389 (ZFAND3-002) 37929959-38142331 protein_coding
ENST00000373391 (ZFAND3-004) 37819798-38154624 protein_coding
ENST00000440482 (ZFAND3-007) 38088331-38152844 processed_transcript
ENST00000463847 (ZFAND3-005) 38142997-38152995 processed_transcript
ENST00000469208 (ZFAND3-003) 38061611-38062660 processed_transcript
ENST00000474522 (ZFAND3-006) 37819942-38116676 protein_coding
ENSG00000200597 (RNU1-87P)
RNA, U1 small nuclear 87, pseudogene 		ENST00000363727 (RNU1-87P-201) 37915573-37915742 snRNA
ENSG00000218521 (RP11-420A21.1)
 ENST00000405398 (RP11-420A21.1-001) 38002832-38003313 processed_pseudogene
ENSG00000225945 (RP3-441A12.1)
 ENST00000415890 (RP3-441A12.1-001) 37815777-37819218 antisense
ENSG00000243313 (RN7SL285P)
RNA, 7SL, cytoplasmic 285, pseudogene 		ENST00000496478 (RN7SL285P-201) 37832922-37833185 misc_RNA
CIL_0004LC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043557-ENSMUSG00000044477 CGP 10090 17:29827956-30210019
GeneTranscriptPositionBiotype
ENSMUSG00000043557 (Mdga1)
MAM domain containing glycosylphosphatidylinositol anchor 1 		ENSMUST00000073556 (Mdga1-201) 29827958-29887882 protein_coding
ENSMUST00000165211 (Mdga1-006) 29849683-29887482 protein_coding
ENSMUST00000165528 (Mdga1-004) 29832056-29842421 retained_intron
ENSMUST00000167102 (Mdga1-005) 29850562-29889950 processed_transcript
ENSMUST00000167190 (Mdga1-003) 29842119-29970087 protein_coding
ENSMUST00000168044 (Mdga1-007) 29832283-29839910 protein_coding
ENSMUST00000170786 (Mdga1-008) 29832266-29835358 processed_transcript
ENSMUST00000171691 (Mdga1-001) 29827956-29888629 protein_coding
ENSMUSG00000044477 (Zfand3)
zinc finger, AN1-type domain 3 		ENSMUST00000057897 (Zfand3-201) 30005087-30210019 protein_coding
ENSMUSG00000086534 (Gm16758)
predicted gene, 16758 		ENSMUST00000149552 (Gm16758-001) 29890084-29897067 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LC_0001ENSDARG00000052833ENSDART00000074761ENSDART00000141228ENSDARG00000074376ENSDART00000110092CIL_0004LC_0002ENSG00000112139ENST00000373401ENST00000418178ENST00000434837ENST00000478143ENST00000502298ENST00000503419ENST00000505425ENST00000508399ENST00000510077ENST00000515437ENSG00000156639ENST00000287218ENST00000373389ENST00000373391ENST00000440482ENST00000463847ENST00000469208ENST00000474522ENSG00000200597ENST00000363727ENSG00000218521ENST00000405398ENSG00000225945ENST00000415890ENSG00000243313ENST00000496478CIL_0004LC_0003ENSMUSG00000043557ENSMUST00000073556ENSMUST00000165211ENSMUST00000165528ENSMUST00000167102ENSMUST00000167190ENSMUST00000168044ENSMUST00000170786ENSMUST00000171691ENSMUSG00000044477ENSMUST00000057897ENSMUSG00000086534ENSMUST00000149552
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LC_0001ENSDARG00000052833ENSDART00000074761ENSDARG00000074376ENSDART00000110092CIL_0004LC_0002ENSG00000112139ENST00000373401ENST00000418178ENST00000434837ENST00000478143ENST00000502298ENST00000505425ENSG00000156639ENST00000287218ENST00000373389ENST00000373391ENST00000440482ENSG00000200597ENST00000363727ENSG00000218521ENST00000405398ENSG00000225945ENST00000415890ENSG00000243313ENST00000496478CIL_0004LC_0003ENSMUSG00000043557ENSMUST00000073556ENSMUST00000165211ENSMUST00000165528ENSMUST00000167102ENSMUST00000167190ENSMUST00000168044ENSMUST00000170786ENSMUST00000171691ENSMUSG00000044477ENSMUST00000057897ENSMUSG00000086534ENSMUST00000149552
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052833 ENSDART00000074761 N/A N/A N/A 14.407±12.43 N/A N/A 19.039±14.74 7.785±2.10 2.330±0.00 N/A 23.117±0.00 N/A N/A N/A
ENSDART00000141228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074376 ENSDART00000110092 N/A N/A N/A 1.666±1.17 N/A N/A 0.852±0.00 0.164±0.00 0.083±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112139 ENST00000373401 0.119±0.00 N/A N/A N/A N/A 0.045±0.00 0.106±0.00 N/A N/A 0.192±0.00 N/A 0.306±0.08 0.039±0.00 0.236±0.00
ENST00000418178 N/A N/A 2.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434837 0.141±0.00 0.323±0.00 0.022±0.00 0.517±0.34 0.193±0.02 0.625±0.00 0.073±0.00 0.096±0.00 N/A 0.192±0.00 N/A 0.496±0.52 0.063±0.01 0.320±0.22
ENST00000478143 N/A N/A 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502298 N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A N/A N/A
ENST00000503419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505425 N/A 0.534±0.00 N/A 0.255±0.00 0.255±0.01 0.425±0.33 0.260±0.17 0.322±0.00 N/A 0.460±0.14 0.245±0.01 1.644±0.99 0.263±0.07 0.612±0.00
ENST00000508399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156639 ENST00000287218 28.391±0.00 13.490±0.00 N/A 9.732±8.10 10.339±8.35 11.511±9.59 16.765±0.00 18.758±0.00 8.455±7.09 19.455±0.00 38.404±0.00 18.455±14.10 23.363±0.65 35.370±14.23
ENST00000373389 N/A N/A 4.059±0.00 N/A N/A N/A N/A 2.474±0.00 N/A N/A 6.369±0.00 3.251±0.00 N/A 36.930±0.00
ENST00000373391 5.432±0.00 N/A 2.083±0.00 4.972±0.00 N/A N/A 4.196±0.00 4.455±0.00 1.292±0.00 5.595±4.56 16.927±0.00 1.941±0.00 N/A 6.398±0.00
ENST00000440482 N/A N/A N/A 1.313±0.00 N/A 2.499±0.00 1.736±0.00 4.159±0.00 N/A 3.376±0.00 N/A 1.667±0.00 N/A N/A
ENST00000463847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200597 ENST00000363727 N/A N/A N/A N/A 0.361±0.00 N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A 0.084±0.00
ENSG00000218521 ENST00000405398 N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A 0.255±0.00 N/A N/A
ENSG00000225945 ENST00000415890 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 0.264±0.11 0.610±0.24
ENSG00000243313 ENST00000496478 0.121±0.00 0.321±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043557 ENSMUST00000073556 0.042±0.00 0.075±0.00 0.503±0.00 4.797±0.00 0.052±0.00 N/A N/A 0.025±0.01 0.083±0.08 0.086±0.01 N/A 0.137±0.06 0.032±0.01 0.103±0.04
ENSMUST00000165211 N/A N/A N/A N/A N/A N/A N/A 0.263±0.03 0.140±0.05 N/A N/A 1.013±0.00 N/A N/A
ENSMUST00000165528 0.702±0.04 0.568±0.16 1.293±0.15 N/A 1.372±0.46 1.083±0.26 6.882±0.85 0.157±0.07 0.779±0.62 1.107±0.09 1.774±0.56 0.696±0.31 0.180±0.02 N/A
ENSMUST00000167102 N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A 0.453±0.00 0.275±0.10 N/A
ENSMUST00000167190 0.109±0.03 0.142±0.03 N/A N/A 1.218±0.09 0.250±0.03 N/A 0.063±0.04 0.224±0.22 N/A 0.875±0.16 0.262±0.12 0.109±0.03 N/A
ENSMUST00000168044 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 0.080±0.00 N/A N/A 0.141±0.00 0.218±0.00 N/A
ENSMUST00000170786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.03 N/A N/A
ENSMUST00000171691 0.084±0.00 0.127±0.05 0.549±0.14 4.050±2.59 0.179±0.18 0.142±0.07 0.604±0.00 0.024±0.02 0.268±0.14 0.083±0.04 1.189±0.48 0.171±0.09 0.066±0.00 N/A
ENSMUSG00000044477 ENSMUST00000057897 29.092±18.20 25.187±2.20 25.833±4.45 18.500±11.99 24.401±3.52 26.556±1.54 16.179±3.75 21.283±5.37 10.837±4.22 33.157±1.35 18.943±10.98 19.860±6.22 19.502±8.08 45.020±13.14
ENSMUSG00000086534 ENSMUST00000149552 0.007±0.00 0.025±0.01 0.071±0.02 0.053±0.00 0.047±0.02 0.022±0.01 0.007±0.00 0.010±0.00 0.040±0.02 0.010±0.00 0.189±0.06 0.040±0.02 0.007±0.00 0.027±0.02

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