C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MAM domain containing glycosylphosphatidylinositol anchor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000043557 Mdga1 10090 - 17:29827956-29970087 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073556 Mdga1-201 29827958-29887882 protein_coding
  ENSMUST00000165211 Mdga1-006 29849683-29887482 protein_coding
  ENSMUST00000165528 Mdga1-004 29832056-29842421 retained_intron
  ENSMUST00000167102 Mdga1-005 29850562-29889950 processed_transcript
  ENSMUST00000167190 Mdga1-003 29842119-29970087 protein_coding
  ENSMUST00000168044 Mdga1-007 29832283-29839910 protein_coding
  ENSMUST00000170786 Mdga1-008 29832266-29835358 processed_transcript
  ENSMUST00000171691 Mdga1-001 29827956-29888629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000073556ENSMUST00000165211ENSMUST00000165528ENSMUST00000167102ENSMUST00000167190ENSMUST00000168044ENSMUST00000170786ENSMUST00000171691
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000073556 0.042±0.00 0.075±0.00 0.503±0.00 4.797±0.00 0.052±0.00 N/A N/A 0.025±0.01 0.083±0.08 0.086±0.01 N/A 0.137±0.06 0.032±0.01 0.103±0.04
ENSMUST00000165211 N/A N/A N/A N/A N/A N/A N/A 0.263±0.03 0.140±0.05 N/A N/A 1.013±0.00 N/A N/A
ENSMUST00000165528 0.702±0.04 0.568±0.16 1.293±0.15 N/A 1.372±0.46 1.083±0.26 6.882±0.85 0.157±0.07 0.779±0.62 1.107±0.09 1.774±0.56 0.696±0.31 0.180±0.02 N/A
ENSMUST00000167102 N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A 0.453±0.00 0.275±0.10 N/A
ENSMUST00000167190 0.109±0.03 0.142±0.03 N/A N/A 1.218±0.09 0.250±0.03 N/A 0.063±0.04 0.224±0.22 N/A 0.875±0.16 0.262±0.12 0.109±0.03 N/A
ENSMUST00000168044 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00 0.080±0.00 N/A N/A 0.141±0.00 0.218±0.00 N/A
ENSMUST00000170786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.147±0.03 N/A N/A
ENSMUST00000171691 0.084±0.00 0.127±0.05 0.549±0.14 4.050±2.59 0.179±0.18 0.142±0.07 0.604±0.00 0.024±0.02 0.268±0.14 0.083±0.04 1.189±0.48 0.171±0.09 0.066±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D2 CIL_0005D2_0002 CGP 17:29689378-29970087
CIL_0004LC CIL_0004LC_0003 CGP 17:29827956-30210019

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0003674 ND molecular_function
GO:0005615 IEA extracellular space
GO:0007420 IEA brain development
GO:0016020 IEA membrane
GO:0021527 IEA spinal cord association neuron differentiation
GO:0021799 IMP cerebral cortex radially oriented cell migration
GO:0046658 IEA anchored component of plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074376 MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 protein_coding Danio_rerio
ENSG00000112139 MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 protein_coding Homo_sapiens

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