C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165436 Lrrcc1-005 ENSMUSG00000027550 10090 + 3:14533934-14551473 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000165436
Transcript ID Colon
ENSMUST00000165436 0.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0002 CGP 3:14533788-14606308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360375 LRRCC1-001 protein_coding Homo_sapiens 0 832
ENST00000414626 LRRCC1-006 protein_coding Homo_sapiens 0 832
ENST00000517875 LRRCC1-002 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000522567 LRRCC1-005 nonsense_mediated_decay Homo_sapiens 0 702
ENST00000522770 LRRCC1-003 nonsense_mediated_decay Homo_sapiens 0 832

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