C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing glycosylphosphatidylinositol anchor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165528 Mdga1-004 ENSMUSG00000043557 10090 - 17:29832056-29842421 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000165528
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000165528 0.702±0.04 0.568±0.16 1.293±0.15 1.372±0.46 1.083±0.26 6.882±0.85 0.157±0.07 0.779±0.62 1.107±0.09 1.774±0.56 0.696±0.31 0.180±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D2 CIL_0005D2_0002 CGP 17:29689378-29970087
CIL_0004LC CIL_0004LC_0003 CGP 17:29827956-30210019

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373401 MDGA1-005 retained_intron Homo_sapiens 0 688
ENST00000418178 MDGA1-012 protein_coding Homo_sapiens 0 523
ENST00000434837 MDGA1-001 protein_coding Homo_sapiens 0 1445
ENST00000502298 MDGA1-010 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000505425 MDGA1-003 protein_coding Homo_sapiens 0 1103

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