C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 3, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165576 Fam3c-001 ENSMUSG00000029672 10090 - 6:22306520-22356166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165576
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165576 3.349±1.38 5.388±1.81 8.477±1.37 3.981±0.79 1.803±0.85 1.333±0.39 2.126±0.54 2.982±0.85 2.919±0.98 8.694±1.22 1.202±0.17 5.702±2.71 4.785±1.97 1.786±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R0 CIL_0003R0_0002 CGP 6:22288227-22356243
CIL_0003R1 CIL_0003R1_0002 CGP 6:22306520-23052916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005794 IEA Golgi apparatus
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0031410 IEA cytoplasmic vesicle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312214 FAM3C2-001 processed_pseudogene Homo_sapiens 0 815
ENST00000359943 FAM3C-001 protein_coding Homo_sapiens 0 987
ENST00000412653 FAM3C-002 protein_coding Homo_sapiens 0 544
ENST00000426156 FAM3C-004 protein_coding Homo_sapiens 0 484
ENST00000474082 FAM3C-006 retained_intron Homo_sapiens 0 255

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