C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165793 Dnajc1-010 ENSMUSG00000026740 10090 - 2:18316792-18392830 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryENSMUST00000165793
Transcript ID Adrenal Breast Colon Lung Ovary
ENSMUST00000165793 22.290±5.30 10.782±0.52 7.412±0.42 12.384±0.00 14.492±2.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096N CIL_00096N_0002 VISTA 2:17746233-18347055
CIL_000781 CIL_000781_0003 CGP 2:18040676-18212388
CIL_0007JW CIL_0007JW_0002 UCNEbase 2:18048722-18311061
CIL_000238 CIL_000238_0002 CGP 2:18055237-18392830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376946 DNAJC1-004 retained_intron Homo_sapiens 0 348
ENST00000376980 DNAJC1-001 protein_coding Homo_sapiens 0 335
ENST00000447548 DNAJC1-005 processed_transcript Homo_sapiens 0 331
ENST00000476103 DNAJC1-003 nonsense_mediated_decay Homo_sapiens 0 340

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