C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376980 DNAJC1-001 ENSG00000136770 9606 - 10:21756537-22003725 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376980 9.068±0.00 7.182±0.00 3.750±0.00 3.016±0.90 6.918±1.59 7.588±5.56 2.430±0.75 9.540±5.25 10.326±3.79 10.618±6.85 6.405±0.00 10.862±5.48 20.013±10.78 13.434±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096N CIL_00096N_0001 VISTA 10:21215719-21816526
CIL_0007JW CIL_0007JW_0001 UCNEbase 10:21518181-21922252
CIL_000238 CIL_000238_0001 CGP 10:21534165-22003769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001671 TAS ATPase activator activity
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005783 ISS endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006417 IEA regulation of translation
GO:0006457 IEA protein folding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0032781 TAS positive regulation of ATPase activity
GO:0045861 TAS negative regulation of proteolysis
GO:0050708 IDA regulation of protein secretion
GO:0051087 IEA chaperone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166495 Dnajc1-001 protein_coding Mus_musculus 0 1967
ENSMUST00000091418 Dnajc1-004 protein_coding Mus_musculus 0 1903
ENSMUST00000028072 Dnajc1-008 nonsense_mediated_decay Mus_musculus 0 1552
ENSMUST00000168723 Dnajc1-005 protein_coding Mus_musculus 0 1022
ENSMUST00000163130 Dnajc1-006 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000164835 Dnajc1-011 nonsense_mediated_decay Mus_musculus 0 695
ENSMUST00000164606 Dnajc1-007 retained_intron Mus_musculus 0 370
ENSMUST00000165793 Dnajc1-010 retained_intron Mus_musculus 0 335
ENSMUST00000153055 Dnajc1-002 processed_transcript Mus_musculus 0 335
ENSMUST00000148401 Dnajc1-003 protein_coding Mus_musculus 0 220

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