C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rab40C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166619 Rab40c-002 ENSMUSG00000025730 10090 - 17:25882117-25913632 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000166619
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166619 19.533±3.55 35.484±5.82 9.510±1.47 21.205±5.63 34.500±4.46 10.003±1.38 10.843±0.82 28.136±1.07 4.298±0.08 27.260±7.48 16.616±9.49 8.187±3.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000248139 RAB40C-001 protein_coding Homo_sapiens 0 922
ENST00000509637 RAB40C-006 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000535977 RAB40C-201 protein_coding Homo_sapiens 0 922
ENST00000538492 RAB40C-202 protein_coding Homo_sapiens 0 922
ENST00000539661 RAB40C-203 protein_coding Homo_sapiens 0 922
ENST00000561781 RAB40C-002 retained_intron Homo_sapiens 0 688
ENST00000563109 RAB40C-003 protein_coding Homo_sapiens 0 551
ENST00000564703 RAB40C-005 protein_coding Homo_sapiens 0 399
ENST00000565511 RAB40C-004 nonsense_mediated_decay Homo_sapiens 0 353
ENST00000566290 RAB40C-008 protein_coding Homo_sapiens 0 643
ENST00000568586 RAB40C-009 protein_coding Homo_sapiens 0 540
ENST00000569575 RAB40C-007 protein_coding Homo_sapiens 0 403

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