C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB40C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000565511 RAB40C-004 ENSG00000197562 9606 + 16:590242-626083 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179998 Rab40c-202 protein_coding Mus_musculus 0 353
ENSMUST00000026826 Rab40c-201 protein_coding Mus_musculus 0 353
ENSMUST00000167018 Rab40c-005 protein_coding Mus_musculus 0 353
ENSMUST00000166619 Rab40c-002 processed_transcript Mus_musculus 0 353
ENSMUST00000167626 Rab40c-001 protein_coding Mus_musculus 0 353
ENSMUST00000166146 Rab40c-003 nonsense_mediated_decay Mus_musculus 0 351
ENSMUST00000164738 Rab40c-006 protein_coding Mus_musculus 0 346
ENSMUST00000164982 Rab40c-004 protein_coding Mus_musculus 0 344
ENSMUST00000172168 Rab40c-007 processed_transcript Mus_musculus 0 281
ENSDART00000087047 rab40c-001 protein_coding Danio_rerio 0 259
ENSMUST00000106107 Rab40b-001 protein_coding Mus_musculus 4.00001e-41 172
ENSMUST00000135290 Rab40b-003 processed_transcript Mus_musculus 2e-23 113
ENSMUST00000124639 Rab40b-002 processed_transcript Mus_musculus 2e-23 113

Loading