C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RAB40C, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509637 RAB40C-006 ENSG00000197562 9606 + 16:590296-625993 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000509637
Transcript ID Kidney
ENST00000509637 1.937±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179998 Rab40c-202 protein_coding Mus_musculus 0 350
ENSMUST00000026826 Rab40c-201 protein_coding Mus_musculus 0 350
ENSMUST00000167018 Rab40c-005 protein_coding Mus_musculus 0 350
ENSMUST00000167626 Rab40c-001 protein_coding Mus_musculus 0 350
ENSMUST00000166619 Rab40c-002 processed_transcript Mus_musculus 0 348
ENSMUST00000172168 Rab40c-007 processed_transcript Mus_musculus 0 287
ENSDART00000087047 rab40c-001 protein_coding Danio_rerio 0 287
ENSMUST00000166146 Rab40c-003 nonsense_mediated_decay Mus_musculus 0 213
ENSMUST00000164738 Rab40c-006 protein_coding Mus_musculus 0 202
ENSMUST00000164982 Rab40c-004 protein_coding Mus_musculus 0 202
ENSMUST00000135290 Rab40b-003 processed_transcript Mus_musculus 6e-23 111
ENSMUST00000124639 Rab40b-002 processed_transcript Mus_musculus 6e-23 111
ENSMUST00000106107 Rab40b-001 protein_coding Mus_musculus 6e-23 111

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