C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing glycosylphosphatidylinositol anchor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167190 Mdga1-003 ENSMUSG00000043557 10090 - 17:29842119-29970087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleOvaryPlacentaENSMUST00000167190
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle Ovary Placenta
ENSMUST00000167190 0.109±0.03 0.142±0.03 1.218±0.09 0.250±0.03 0.063±0.04 0.224±0.22 0.875±0.16 0.262±0.12 0.109±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D2 CIL_0005D2_0002 CGP 17:29689378-29970087
CIL_0004LC CIL_0004LC_0003 CGP 17:29827956-30210019

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0003674 ND molecular_function
GO:0021799 IMP cerebral cortex radially oriented cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000434837 MDGA1-001 protein_coding Homo_sapiens 0 2588
ENST00000478143 MDGA1-002 retained_intron Homo_sapiens 0 1339
ENST00000505425 MDGA1-003 protein_coding Homo_sapiens 0 2403

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