C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: praja ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167246 Pja1-201 ENSMUSG00000034403 10090 - X:99465768-99470735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167246
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167246 8.747±2.18 19.885±0.96 14.232±2.36 37.867±7.05 5.144±2.52 12.516±1.56 3.712±0.77 11.182±1.75 9.395±2.67 9.547±1.35 2.464±0.77 25.301±4.59 8.075±3.79 15.070±6.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TA CIL_0001TA_0002 CGP X:99136130-99471273
CIL_0002RH CIL_0002RH_0002 CGP X:99465734-99848790

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030163 IDA protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361478 PJA1-001 protein_coding Homo_sapiens 0 990
ENST00000374571 PJA1-006 protein_coding Homo_sapiens 0 950
ENST00000374583 PJA1-005 protein_coding Homo_sapiens 0 992
ENST00000374584 PJA1-002 protein_coding Homo_sapiens 0 992
ENST00000477231 PJA1-004 processed_transcript Homo_sapiens 0 507
ENST00000590146 PJA1-007 protein_coding Homo_sapiens 0 327

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