C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167623 Cdh18-005 ENSMUSG00000040420 10090 + 15:23173864-23474029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverOvaryPlacentaTestisENSMUST00000167623
Transcript ID Adipose Breast Liver Ovary Placenta Testis
ENSMUST00000167623 0.064±0.00 0.077±0.00 0.030±0.03 0.039±0.00 0.021±0.01 0.257±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XA CIL_0003XA_0003 CGP 15:21111452-23474418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274170 CDH18-201 protein_coding Homo_sapiens 0 1443
ENST00000382275 CDH18-001 protein_coding Homo_sapiens 0 1443
ENST00000502796 CDH18-003 protein_coding Homo_sapiens 0 1443
ENST00000506372 CDH18-004 protein_coding Homo_sapiens 0 1443
ENST00000507958 CDH18-005 protein_coding Homo_sapiens 0 1443
ENST00000508350 CDH18-010 processed_transcript Homo_sapiens 0 486
ENST00000511273 CDH18-002 protein_coding Homo_sapiens 0 1443
ENST00000515257 CDH18-006 protein_coding Homo_sapiens 0 1781

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