C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167858 Lrrcc1-003 ENSMUSG00000027550 10090 + 3:14548117-14566406 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverOvaryPlacentaENSMUST00000167858
Transcript ID Adrenal Brain Colon Liver Ovary Placenta
ENSMUST00000167858 0.225±0.06 4.267±0.00 0.215±0.00 0.069±0.00 2.345±0.37 1.771±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0002 CGP 3:14533788-14606308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360375 LRRCC1-001 protein_coding Homo_sapiens 0 1598
ENST00000414626 LRRCC1-006 protein_coding Homo_sapiens 0 1598
ENST00000517875 LRRCC1-002 nonsense_mediated_decay Homo_sapiens 0 1164
ENST00000522567 LRRCC1-005 nonsense_mediated_decay Homo_sapiens 0 1206
ENST00000522770 LRRCC1-003 nonsense_mediated_decay Homo_sapiens 0 1205

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