C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine palmitoyltransferase, long chain base subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167911 Sptlc2-004 ENSMUSG00000021036 10090 - 12:87346734-87388241 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000167911
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000167911 9.763±0.00 62.987±10.47 9.536±0.00 27.949±11.72 10.898±0.00 4.428±1.15 20.754±4.00 1.159±0.08 11.643±0.00 33.685±12.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064L CIL_00064L_0003 CGP 12:87278638-87388355
CIL_0004TW CIL_0004TW_0002 CGP 12:87305058-87444017

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216484 SPTLC2-001 protein_coding Homo_sapiens 0 852
ENST00000554901 SPTLC2-002 protein_coding Homo_sapiens 0 610
ENST00000557566 SPTLC2-003 retained_intron Homo_sapiens 0 479

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