C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing glycosylphosphatidylinositol anchor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168044 Mdga1-007 ENSMUSG00000043557 10090 - 17:29832283-29839910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaENSMUST00000168044
Transcript ID Kidney Liver Ovary Placenta
ENSMUST00000168044 0.073±0.00 0.080±0.00 0.141±0.00 0.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D2 CIL_0005D2_0002 CGP 17:29689378-29970087
CIL_0004LC CIL_0004LC_0003 CGP 17:29827956-30210019

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0003674 ND molecular_function
GO:0016020 IEA membrane
GO:0021799 IMP cerebral cortex radially oriented cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373401 MDGA1-005 retained_intron Homo_sapiens 0 213
ENST00000418178 MDGA1-012 protein_coding Homo_sapiens 0 431
ENST00000434837 MDGA1-001 protein_coding Homo_sapiens 0 708
ENST00000502298 MDGA1-010 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000505425 MDGA1-003 protein_coding Homo_sapiens 0 708

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