C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activated leukocyte cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168071 Alcam-002 ENSMUSG00000022636 10090 - 16:52305264-52452654 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryENSMUST00000168071
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary
ENSMUST00000168071 7.800±1.64 4.034±0.00 6.908±1.49 4.634±0.65 0.715±0.13 2.961±0.00 43.937±6.62 6.037±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IY CIL_0003IY_0002 CGP 16:52031549-52454074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007411 IMP axon guidance
GO:0008045 IMP motor neuron axon guidance
GO:0009897 IDA external side of plasma membrane
GO:0030424 IDA axon
GO:0043025 IDA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306107 ALCAM-001 protein_coding Homo_sapiens 0 604
ENST00000470756 ALCAM-003 retained_intron Homo_sapiens 0 632
ENST00000472644 ALCAM-002 protein_coding Homo_sapiens 0 525
ENST00000481337 ALCAM-004 processed_transcript Homo_sapiens 0 405
ENST00000486979 ALCAM-005 protein_coding Homo_sapiens 0 405

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