C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activated leukocyte cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486979 ALCAM-005 ENSG00000170017 9606 + 3:105513325-105574552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryTestisENST00000486979
Transcript ID Brain Colon Heart Liver Lung Ovary Testis
ENST00000486979 6.172±0.00 1.540±0.00 0.572±0.00 5.212±0.00 15.442±0.00 6.250±0.00 0.751±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023312 Alcam-001 protein_coding Mus_musculus 0 2202
ENSMUST00000164728 Alcam-005 protein_coding Mus_musculus 0 2004
ENSMUST00000170035 Alcam-004 protein_coding Mus_musculus 0 1759
ENSMUST00000167115 Alcam-003 protein_coding Mus_musculus 0 1116
ENSMUST00000164888 Alcam-006 retained_intron Mus_musculus 0 490
ENSMUST00000168071 Alcam-002 protein_coding Mus_musculus 0 405
ENSMUST00000163788 Alcam-007 retained_intron Mus_musculus 0 318

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