C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activated leukocyte cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306107 ALCAM-001 ENSG00000170017 9606 + 3:105366909-105576900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306107 1.207±0.00 2.340±0.00 1.541±0.00 13.380±4.66 4.549±1.64 5.510±0.00 0.368±0.15 4.334±2.21 5.299±1.79 12.823±5.08 0.231±0.00 7.187±4.12 2.061±1.21 1.955±1.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005925 IDA focal adhesion
GO:0007155 IEA cell adhesion
GO:0007165 TAS signal transduction
GO:0007411 TAS axon guidance
GO:0008045 IEA motor neuron axon guidance
GO:0009897 IEA external side of plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030424 IEA axon
GO:0043025 IEA neuronal cell body
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023312 Alcam-001 protein_coding Mus_musculus 0 2904
ENSMUST00000164728 Alcam-005 protein_coding Mus_musculus 0 2067
ENSMUST00000170035 Alcam-004 protein_coding Mus_musculus 0 1821
ENSMUST00000167115 Alcam-003 protein_coding Mus_musculus 0 1587
ENSMUST00000168071 Alcam-002 protein_coding Mus_musculus 0 604
ENSMUST00000164888 Alcam-006 retained_intron Mus_musculus 0 490
ENSMUST00000163788 Alcam-007 retained_intron Mus_musculus 0 318

Loading