C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activated leukocyte cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472644 ALCAM-002 ENSG00000170017 9606 + 3:105367343-105576861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000472644
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000472644 0.958±0.00 0.708±0.00 7.403±1.00 1.371±0.74 0.174±0.03 1.302±0.00 1.740±0.00 7.774±4.87 2.889±0.83 0.745±0.18 0.410±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005925 IDA focal adhesion
GO:0007155 IEA cell adhesion
GO:0007165 TAS signal transduction
GO:0007411 TAS axon guidance
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170035 Alcam-004 protein_coding Mus_musculus 0 2322
ENSMUST00000023312 Alcam-001 protein_coding Mus_musculus 0 1879
ENSMUST00000164728 Alcam-005 protein_coding Mus_musculus 0 1821
ENSMUST00000167115 Alcam-003 protein_coding Mus_musculus 0 856
ENSMUST00000168071 Alcam-002 protein_coding Mus_musculus 0 525
ENSMUST00000163788 Alcam-007 retained_intron Mus_musculus 0 257
ENSMUST00000164888 Alcam-006 retained_intron Mus_musculus 0 222

Loading