C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vang-like 1 (van gogh, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168312 Vangl1-201 ENSMUSG00000027860 10090 - 3:102158183-102203963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000168312
Transcript ID Brain Ovary Testis
ENSMUST00000168312 0.275±0.00 1.516±0.00 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0002 VISTA 3:101762054-102363652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0007275 IEA multicellular organismal development
GO:0016021 ISS integral component of membrane
GO:0016328 IDA lateral plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310260 VANGL1-003 protein_coding Homo_sapiens 0 1275
ENST00000355485 VANGL1-201 protein_coding Homo_sapiens 0 1275
ENST00000369509 VANGL1-002 protein_coding Homo_sapiens 0 1266
ENST00000369510 VANGL1-001 protein_coding Homo_sapiens 0 1236
ENST00000474344 VANGL1-005 processed_transcript Homo_sapiens 0 337
ENST00000478369 VANGL1-004 processed_transcript Homo_sapiens 0 329

Loading