C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(rC) binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168465 Pcbp3-201 ENSMUSG00000001120 10090 - 10:76761858-76825869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000168465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000168465 1.432±0.00 3.767±2.40 4.896±1.36 5.197±0.00 1.135±0.46 1.130±0.66 0.445±0.13 2.969±0.59 0.336±0.26 3.923±1.02 0.450±0.20 2.472±1.47 2.370±2.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000048893 pcbp3-201 protein_coding Danio_rerio 0 802
ENSDART00000134431 pcbp3-003 protein_coding Danio_rerio 0 640
ENSDART00000148317 pcbp3-004 protein_coding Danio_rerio 0 640
ENSDART00000015267 pcbp3-001 protein_coding Danio_rerio 0 640
ENSDART00000025885 pcbp2-001 protein_coding Danio_rerio 0 470
ENSDART00000144448 pcbp3-005 nonsense_mediated_decay Danio_rerio 0 401
ENSDART00000131317 pcbp2-004 protein_coding Danio_rerio 0 327
ENST00000400304 PCBP3-003 protein_coding Homo_sapiens 0 828
ENST00000400305 PCBP3-009 protein_coding Homo_sapiens 0 712
ENST00000400308 PCBP3-005 protein_coding Homo_sapiens 0 798
ENST00000400309 PCBP3-004 protein_coding Homo_sapiens 0 1626
ENST00000400310 PCBP3-002 protein_coding Homo_sapiens 0 1146
ENST00000400314 PCBP3-001 protein_coding Homo_sapiens 0 1644
ENST00000449640 PCBP3-201 protein_coding Homo_sapiens 0 939
ENST00000468429 PCBP3-010 processed_transcript Homo_sapiens 0 1225
ENST00000475402 PCBP3-011 processed_transcript Homo_sapiens 0 396
ENST00000498121 PCBP3-008 retained_intron Homo_sapiens 0 440

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