| Transcript ID | Kidney | Liver | Ovary | Placenta |
|---|---|---|---|---|
| ENSMUST00000168660 | 0.017±0.00 | 0.052±0.00 | 0.217±0.00 | 0.021±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | chloride channel 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000168660  |
Clcn1-005 |
ENSMUSG00000029862 |
10090 | + |
6:42286866-42313957  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006VM | CIL_0006VM_0002 | CGP | 6:42264985-42315756 |
| CIL_0006VN | CIL_0006VN_0002 | CGP | 6:42286685-42324643 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005247 | IEA | voltage-gated chloride channel activity |
| GO:0006821 | IMP | chloride transport |
| GO:0019227 | IMP | neuronal action potential propagation |
| GO:0034220 | IEA | ion transmembrane transport |
| GO:0042383 | IDA | sarcolemma |
| GO:0044070 | IEA | regulation of anion transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000265593
|
CLCN2-001 | protein_coding | Homo_sapiens | 6e-40 | 171 |
|
ENST00000343257
|
CLCN1-001 | protein_coding | Homo_sapiens | 0 | 2137 |
|
ENST00000344937
|
CLCN2-004 | protein_coding | Homo_sapiens | 7e-29 | 134 |
|
ENST00000430397
|
CLCN2-006 | nonsense_mediated_decay | Homo_sapiens | 4e-29 | 134 |
|
ENST00000432192
|
CLCN1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 388 |
|
ENST00000434054
|
CLCN2-003 | protein_coding | Homo_sapiens | 5e-40 | 171 |
|
ENST00000455478
|
CLCN1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 388 |
|
ENST00000457512
|
CLCN2-002 | protein_coding | Homo_sapiens | 5e-40 | 171 |
|
ENST00000495612
|
CLCN1-004 | processed_transcript | Homo_sapiens | 7.00649e-44 | 180 |
