C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006VM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106144-ENSG00000188037 CGP 9606 7:143288215-143352083
GeneTranscriptPositionBiotype
ENSG00000106144 (CASP2)
caspase 2, apoptosis-related cysteine peptidase 		ENST00000310447 (CASP2-001) 143288215-143307696 protein_coding
ENST00000350623 (CASP2-003) 143288451-143305071 nonsense_mediated_decay
ENST00000392925 (CASP2-005) 143288395-143293226 protein_coding
ENST00000472067 (CASP2-004) 143294604-143306569 retained_intron
ENST00000481483 (CASP2-006) 143291618-143294481 retained_intron
ENST00000493642 (CASP2-002) 143289588-143305822 processed_transcript
ENST00000619992 (CASP2-201) 143288215-143307695 protein_coding
ENSG00000188037 (CLCN1)
chloride channel, voltage-sensitive 1 		ENST00000343257 (CLCN1-001) 143316126-143352083 protein_coding
ENST00000432192 (CLCN1-002) 143321474-143330895 nonsense_mediated_decay
ENST00000455478 (CLCN1-003) 143321474-143330895 nonsense_mediated_decay
ENST00000495612 (CLCN1-004) 143321474-143330895 processed_transcript
ENSG00000231531 (HINT1P1)
histidine triad nucleotide binding protein 1 pseudogene 1 		ENST00000464866 (HINT1P1-001) 143312684-143313061 processed_pseudogene
ENSG00000239419 (RN7SL535P)
RNA, 7SL, cytoplasmic 535, pseudogene 		ENST00000479087 (RN7SL535P-201) 143290615-143290910 misc_RNA
ENSG00000240322 (RN7SL481P)
RNA, 7SL, cytoplasmic 481, pseudogene 		ENST00000477764 (RN7SL481P-201) 143298516-143298814 misc_RNA
CIL_0006VM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029863-ENSMUSG00000029862 CGP 10090 6:42264985-42315756
GeneTranscriptPositionBiotype
ENSMUSG00000029861 (Fam131b)
family with sequence similarity 131, member B 		ENSMUST00000031891 (Fam131b-002) 42315312-42324640 protein_coding
ENSMUST00000095974 (Fam131b-003) 42315313-42324592 protein_coding
ENSMUST00000143278 (Fam131b-001) 42315312-42324643 protein_coding
ENSMUSG00000029862 (Clcn1)
chloride channel 1 		ENSMUST00000031894 (Clcn1-001) 42286685-42314656 protein_coding
ENSMUST00000114684 (Clcn1-008) 42298900-42315756 protein_coding
ENSMUST00000163235 (Clcn1-009) 42310145-42313064 nonsense_mediated_decay
ENSMUST00000163936 (Clcn1-003) 42286856-42314178 protein_coding
ENSMUST00000164091 (Clcn1-007) 42286767-42314178 nonsense_mediated_decay
ENSMUST00000165780 (Clcn1-006) 42286856-42314178 nonsense_mediated_decay
ENSMUST00000168660 (Clcn1-005) 42286866-42313957 nonsense_mediated_decay
ENSMUST00000169024 (Clcn1-004) 42286856-42314229 nonsense_mediated_decay
ENSMUST00000169902 (Clcn1-010) 42312492-42313344 retained_intron
ENSMUST00000170028 (Clcn1-002) 42286856-42314178 nonsense_mediated_decay
ENSMUSG00000029863 (Casp2)
caspase 2 		ENSMUST00000031895 (Casp2-001) 42264985-42282508 protein_coding
ENSMUST00000132246 (Casp2-005) 42267391-42268030 processed_transcript
ENSMUST00000132398 (Casp2-008) 42276487-42280533 retained_intron
ENSMUST00000139930 (Casp2-004) 42265056-42269122 retained_intron
ENSMUST00000141669 (Casp2-006) 42268010-42269607 processed_transcript
ENSMUST00000141727 (Casp2-010) 42279781-42280641 processed_transcript
ENSMUST00000144821 (Casp2-007) 42269285-42279897 processed_transcript
ENSMUST00000152893 (Casp2-009) 42279637-42280490 processed_transcript
ENSMUST00000156829 (Casp2-003) 42265120-42280492 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VM_0001ENSG00000106144ENST00000310447ENST00000350623ENST00000392925ENST00000472067ENST00000481483ENST00000493642ENST00000619992ENSG00000188037ENST00000343257ENST00000432192ENST00000455478ENST00000495612ENSG00000231531ENST00000464866ENSG00000239419ENST00000479087ENSG00000240322ENST00000477764CIL_0006VM_0002ENSMUSG00000029861ENSMUST00000031891ENSMUST00000095974ENSMUST00000143278ENSMUSG00000029862ENSMUST00000031894ENSMUST00000114684ENSMUST00000163235ENSMUST00000163936ENSMUST00000164091ENSMUST00000165780ENSMUST00000168660ENSMUST00000169024ENSMUST00000169902ENSMUST00000170028ENSMUSG00000029863ENSMUST00000031895ENSMUST00000132246ENSMUST00000132398ENSMUST00000139930ENSMUST00000141669ENSMUST00000141727ENSMUST00000144821ENSMUST00000152893ENSMUST00000156829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006VM_0001ENSG00000106144ENST00000310447ENST00000350623ENST00000392925ENST00000472067ENST00000493642ENST00000619992ENSG00000188037ENST00000343257ENST00000495612ENSG00000231531ENST00000464866ENSG00000239419ENST00000479087ENSG00000240322ENST00000477764CIL_0006VM_0002ENSMUSG00000029861ENSMUST00000031891ENSMUST00000095974ENSMUST00000143278ENSMUSG00000029862ENSMUST00000031894ENSMUST00000114684ENSMUST00000163235ENSMUST00000163936ENSMUST00000164091ENSMUST00000168660ENSMUST00000169024ENSMUST00000169902ENSMUSG00000029863ENSMUST00000031895ENSMUST00000132246ENSMUST00000156829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106144 ENST00000310447 3.236±0.00 3.934±0.00 0.576±0.00 N/A 1.919±0.00 2.410±0.29 1.029±0.00 3.879±0.00 0.562±0.00 2.547±1.24 0.548±0.00 6.152±4.04 5.998±2.33 5.018±0.45
ENST00000350623 N/A N/A N/A 0.514±0.00 1.626±0.00 N/A N/A N/A 0.935±0.00 N/A 0.947±0.00 1.959±0.00 N/A N/A
ENST00000392925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.144±0.00
ENST00000472067 N/A N/A 0.269±0.00 0.265±0.00 0.765±0.00 0.558±0.00 N/A 0.121±0.00 0.337±0.00 0.739±0.00 0.163±0.00 0.724±0.00 N/A N/A
ENST00000481483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493642 N/A N/A 0.634±0.00 0.235±0.00 N/A 1.893±0.00 N/A N/A N/A 0.872±0.00 N/A N/A N/A 1.283±0.00
ENST00000619992 1.564±0.00 4.869±0.00 0.211±0.00 0.970±0.80 2.134±0.74 1.019±0.00 0.495±0.25 0.598±0.00 1.245±0.00 0.877±0.00 0.180±0.00 2.068±0.51 1.615±0.31 N/A
ENSG00000188037 ENST00000343257 0.006±0.00 0.033±0.00 N/A 0.023±0.00 0.497±0.00 0.006±0.00 0.012±0.00 0.014±0.00 0.108±0.00 0.051±0.00 2.758±0.00 0.117±0.00 0.035±0.02 N/A
ENST00000432192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495612 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A 0.158±0.00 N/A
ENSG00000231531 ENST00000464866 N/A 0.038±0.00 N/A 0.116±0.08 0.038±0.00 0.104±0.00 N/A 0.038±0.00 0.033±0.00 0.035±0.00 0.033±0.00 N/A N/A 0.301±0.04
ENSG00000239419 ENST00000479087 0.599±0.00 1.902±0.00 N/A 0.182±0.04 0.198±0.00 0.060±0.00 0.366±0.25 0.451±0.00 2.296±0.00 0.061±0.00 N/A 0.285±0.03 N/A N/A
ENSG00000240322 ENST00000477764 0.108±0.00 0.847±0.00 0.968±0.00 1.317±0.00 0.231±0.00 0.941±0.00 0.333±0.17 N/A N/A 0.218±0.05 N/A 1.065±0.54 N/A 0.160±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029861 ENSMUST00000031891 N/A N/A 0.154±0.00 N/A 0.467±0.00 0.377±0.00 N/A N/A 0.048±0.00 0.297±0.00 N/A 0.329±0.12 N/A N/A
ENSMUST00000095974 0.608±0.23 0.089±0.07 0.152±0.00 13.466±0.00 0.427±0.00 0.149±0.02 N/A 0.033±0.00 0.066±0.04 N/A N/A 0.342±0.24 0.105±0.06 2.694±0.90
ENSMUST00000143278 1.617±0.96 N/A 0.456±0.00 9.062±5.02 0.992±0.01 0.288±0.07 N/A 0.034±0.00 0.045±0.00 0.262±0.06 N/A 0.434±0.02 0.062±0.02 1.268±0.00
ENSMUSG00000029862 ENSMUST00000031894 N/A 0.030±0.00 N/A N/A 3.611±1.07 N/A N/A 0.160±0.00 N/A 0.096±0.01 34.981±2.53 0.081±0.00 N/A N/A
ENSMUST00000114684 N/A 0.033±0.01 0.060±0.01 4.296±0.50 7.544±1.10 0.063±0.00 3.378±0.48 0.029±0.00 0.027±0.01 0.183±0.04 27.167±1.79 0.137±0.09 0.061±0.04 N/A
ENSMUST00000163235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 0.289±0.00 N/A
ENSMUST00000163936 N/A 0.030±0.01 N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A 0.068±0.00 N/A N/A
ENSMUST00000164091 N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000165780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168660 N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.052±0.00 N/A N/A 0.217±0.00 0.021±0.00 N/A
ENSMUST00000169024 N/A N/A N/A N/A N/A 0.179±0.00 1.218±0.00 N/A N/A N/A N/A N/A 0.025±0.00 N/A
ENSMUST00000169902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.06 N/A
ENSMUST00000170028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029863 ENSMUST00000031895 12.234±4.98 7.537±1.01 10.480±0.34 17.441±12.40 12.353±3.24 17.869±2.85 2.459±0.33 5.215±1.42 9.387±8.96 16.613±0.70 0.787±0.38 19.478±8.06 5.776±3.56 1.897±0.86
ENSMUST00000132246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.614±0.00 N/A
ENSMUST00000132398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156829 N/A N/A N/A 0.990±0.00 N/A N/A N/A N/A 0.412±0.00 N/A 0.582±0.00 N/A N/A N/A

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