C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chloride channel, voltage-sensitive 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430397 CLCN2-006 ENSG00000114859 9606 - 3:184346221-184357020 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000430397
Transcript ID Kidney
ENST00000430397 0.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_00056Z CIL_00056Z_0001 CGP 3:184314495-184346275
CIL_000570 CIL_000570_0001 CGP 3:184335926-184361651
CIL_00056X CIL_00056X_0001 CGP 3:184346185-184368596

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131522 Clcn2-002 nonsense_mediated_decay Mus_musculus 0 889
ENSMUST00000007207 Clcn2-001 protein_coding Mus_musculus 0 889
ENSMUST00000120099 Clcn2-005 protein_coding Mus_musculus 0 822
ENSMUST00000153075 Clcn2-004 retained_intron Mus_musculus 0 769
ENSMUST00000148131 Clcn2-003 retained_intron Mus_musculus 0 353
ENSMUST00000131833 Clcn2-007 retained_intron Mus_musculus 6.99949e-42 176
ENSMUST00000114684 Clcn1-008 protein_coding Mus_musculus 4e-29 134
ENSMUST00000168660 Clcn1-005 nonsense_mediated_decay Mus_musculus 4e-29 134
ENSMUST00000169024 Clcn1-004 nonsense_mediated_decay Mus_musculus 4e-29 134
ENSMUST00000165780 Clcn1-006 nonsense_mediated_decay Mus_musculus 4e-29 134
ENSMUST00000163936 Clcn1-003 protein_coding Mus_musculus 4e-29 134
ENSMUST00000170028 Clcn1-002 nonsense_mediated_decay Mus_musculus 4e-29 134
ENSMUST00000164091 Clcn1-007 nonsense_mediated_decay Mus_musculus 4e-29 134
ENSMUST00000031894 Clcn1-001 protein_coding Mus_musculus 4e-29 134
ENSMUST00000056518 Fam131a-001 protein_coding Mus_musculus 0.00000000003 75
ENSMUST00000118919 Fam131a-002 protein_coding Mus_musculus 0.000000004 68

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