C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8038
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168705 Gm8038-201 ENSMUSG00000091981 10090 - 6:50619822-50621885 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungOvaryPlacentaENSMUST00000168705
Transcript ID Bladder Brain Liver Lung Ovary Placenta
ENSMUST00000168705 0.015±0.00 0.012±0.00 0.008±0.00 0.025±0.00 0.043±0.00 0.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099B CIL_00099B_0002 VISTA 6:50510700-51111821
CIL_00094X CIL_00094X_0002 VISTA 6:50521119-51123589
CIL_0009C1 CIL_0009C1_0002 VISTA 6:50589578-51192588

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377327 CRNKL1-001 protein_coding Homo_sapiens 0 2002
ENST00000377340 CRNKL1-002 protein_coding Homo_sapiens 0 2002
ENST00000490910 CRNKL1-003 nonsense_mediated_decay Homo_sapiens 0 1977
ENST00000496549 CRNKL1-004 nonsense_mediated_decay Homo_sapiens 0 1973
ENST00000536226 CRNKL1-007 protein_coding Homo_sapiens 0 2002

Loading