C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 1, K polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168729 Tgm1-202 ENSMUSG00000022218 10090 - 14:55700009-55713492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverTestisENSMUST00000168729
Transcript ID Breast Colon Liver Testis
ENSMUST00000168729 0.935±0.22 0.069±0.02 1.367±0.72 0.245±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SE CIL_0001SE_0002 CGP 14:55679083-55713492
CIL_0001SH CIL_0001SH_0002 CGP 14:55700009-55722257

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003810 IEA protein-glutamine gamma-glutamyltransferase activity
GO:0005515 IEA protein binding
GO:0005913 IDA cell-cell adherens junction
GO:0009887 IMP organ morphogenesis
GO:0018149 IEA peptide cross-linking
GO:0019538 TAS protein metabolic process
GO:0030216 IEA keratinocyte differentiation
GO:0031224 IEA intrinsic component of membrane
GO:0031424 IEA keratinization
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000206765 TGM1-001 protein_coding Homo_sapiens 0 2638
ENST00000544573 TGM1-002 protein_coding Homo_sapiens 0 1424
ENST00000558074 TGM1-008 protein_coding Homo_sapiens 0 209
ENST00000559136 TGM1-009 protein_coding Homo_sapiens 0 1026

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