| Transcript ID | Breast |
|---|---|
| ENSMUST00000168855 | 4.521±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | 3-hydroxy-3-methylglutaryl-Coenzyme A reductase | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000168855  |
Hmgcr-006 |
ENSMUSG00000021670 |
10090 | - |
13:96650276-96666763  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002XB | CIL_0002XB_0003 | CGP | 13:96542618-96670936 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004420 | IDA | hydroxymethylglutaryl-CoA reductase (NADPH) activity |
| GO:0006695 | IDA | cholesterol biosynthetic process |
| GO:0008542 | IGI | visual learning |
| GO:0015936 | IEA | coenzyme A metabolic process |
| GO:0043407 | IGI | negative regulation of MAP kinase activity |
| GO:0050662 | IEA | coenzyme binding |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000287936
|
HMGCR-001 | protein_coding | Homo_sapiens | 0 | 959 |
|
ENST00000343975
|
HMGCR-004 | protein_coding | Homo_sapiens | 0 | 959 |
|
ENST00000509085
|
HMGCR-005 | protein_coding | Homo_sapiens | 0 | 350 |
|
ENST00000511206
|
HMGCR-002 | protein_coding | Homo_sapiens | 0 | 959 |
|
ENST00000511986
|
HMGCR-006 | protein_coding | Homo_sapiens | 0 | 342 |
|
ENST00000512053
|
HMGCR-014 | retained_intron | Homo_sapiens | 0 | 399 |
|
ENST00000514315
|
HMGCR-013 | retained_intron | Homo_sapiens | 0 | 508 |
