C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxisome proliferator activator receptor delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169040 Ppard-005 ENSMUSG00000002250 10090 + 17:28272193-28298716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000169040
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000169040 6.472±0.00 5.442±0.00 17.396±12.43 0.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0004LU CIL_0004LU_0003 CGP 17:28207778-28301469
CIL_0002EQ CIL_0002EQ_0002 CGP 17:28232754-28326568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001890 IMP placenta development
GO:0003677 IDA DNA binding
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 TAS ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0006629 IMP lipid metabolic process
GO:0008270 IEA zinc ion binding
GO:0008283 IMP cell proliferation
GO:0008284 IMP positive regulation of cell proliferation
GO:0008366 IMP axon ensheathment
GO:0008544 TAS epidermis development
GO:0009987 TAS cellular process
GO:0014068 IDA positive regulation of phosphatidylinositol 3-kinase signaling
GO:0030154 IDA cell differentiation
GO:0030522 IEA intracellular receptor signaling pathway
GO:0031589 IMP cell-substrate adhesion
GO:0042060 IMP wound healing
GO:0042127 IGI regulation of cell proliferation
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0043616 IMP keratinocyte proliferation
GO:0045598 IMP regulation of fat cell differentiation
GO:0050680 IGI negative regulation of epithelial cell proliferation
GO:0051546 IMP keratinocyte migration
GO:0060612 IMP adipose tissue development
GO:0071456 IGI cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311565 PPARD-002 protein_coding Homo_sapiens 0 1000
ENST00000318247 RORC-001 protein_coding Homo_sapiens 0.000000001 69
ENST00000337400 PPARD-003 protein_coding Homo_sapiens 0 1000
ENST00000356728 RORC-002 protein_coding Homo_sapiens 0.000000002 69
ENST00000360694 PPARD-201 protein_coding Homo_sapiens 0 1000
ENST00000418635 PPARD-202 protein_coding Homo_sapiens 0 457
ENST00000448077 PPARD-203 protein_coding Homo_sapiens 0 830

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