C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169079 Lrrcc1-001 ENSMUSG00000027550 10090 + 3:14533823-14568301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000169079
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000169079 0.427±0.05 0.259±0.11 1.037±0.06 2.272±0.29 0.656±0.21 0.513±0.14 0.384±0.15 0.720±0.16 0.381±0.24 0.959±0.51 0.268±0.09 1.189±0.69 0.651±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0002 CGP 3:14533788-14606308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360375 LRRCC1-001 protein_coding Homo_sapiens 0 3013
ENST00000414626 LRRCC1-006 protein_coding Homo_sapiens 0 2946
ENST00000517875 LRRCC1-002 nonsense_mediated_decay Homo_sapiens 0 2021
ENST00000522567 LRRCC1-005 nonsense_mediated_decay Homo_sapiens 0 1519
ENST00000522770 LRRCC1-003 nonsense_mediated_decay Homo_sapiens 0 2060

Loading