C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger and CHY zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169948 Rchy1-004 ENSMUSG00000029397 10090 - 5:91949001-91962735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000169948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000169948 4.188±1.84 8.044±1.85 8.398±0.73 5.451±3.04 11.306±4.45 6.286±1.92 3.225±0.85 5.327±1.63 7.282±4.10 9.312±1.72 5.021±1.29 9.299±3.74 5.915±2.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SD CIL_0006SD_0002 CGP 5:91517615-91963068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324439 RCHY1-001 protein_coding Homo_sapiens 0 717
ENST00000380840 RCHY1-005 protein_coding Homo_sapiens 0 795
ENST00000504085 RCHY1-006 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000505105 RCHY1-003 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000505514 RCHY1-014 retained_intron Homo_sapiens 0 442
ENST00000507014 RCHY1-012 protein_coding Homo_sapiens 0 643
ENST00000512567 RCHY1-008 retained_intron Homo_sapiens 0 582
ENST00000512706 RCHY1-011 protein_coding Homo_sapiens 0 717
ENST00000513083 RCHY1-007 retained_intron Homo_sapiens 0 442
ENST00000513257 RCHY1-004 protein_coding Homo_sapiens 0 551
ENST00000513909 RCHY1-013 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000514021 RCHY1-009 processed_transcript Homo_sapiens 0 255
ENST00000514589 RCHY1-002 retained_intron Homo_sapiens 0 392
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0.00000003 68

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