C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | pumilio RNA-binding family member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000170037  |
Pum2-007 |
ENSMUSG00000020594 |
10090 | + |
12:8698096-8713913  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PO | CIL_0008PO_0002 | VISTA | 12:8085675-8687404 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003723 | IDA | RNA binding |
| GO:0010494 | IDA | cytoplasmic stress granule |
| GO:0034063 | IDA | stress granule assembly |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000319801
|
PUM2-201 | protein_coding | Homo_sapiens | 0 | 1589 |
|
ENST00000338086
|
PUM2-001 | protein_coding | Homo_sapiens | 0 | 1280 |
|
ENST00000361078
|
PUM2-202 | protein_coding | Homo_sapiens | 0 | 1085 |
|
ENST00000403432
|
PUM2-002 | protein_coding | Homo_sapiens | 0 | 1280 |
|
ENST00000420234
|
PUM2-007 | processed_transcript | Homo_sapiens | 0 | 496 |
|
ENST00000424110
|
PUM2-009 | protein_coding | Homo_sapiens | 3e-25 | 119 |
|
ENST00000429419
|
PUM2-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 702 |
|
ENST00000432105
|
PUM2-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 843 |
|
ENST00000440577
|
PUM2-003 | protein_coding | Homo_sapiens | 0 | 819 |
|
ENST00000442400
|
PUM2-006 | protein_coding | Homo_sapiens | 0 | 1280 |
|
ENST00000446940
|
PUM2-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 699 |
