C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: pumilio RNA-binding family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442400 PUM2-006 ENSG00000055917 9606 - 2:20307981-20352222 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyENST00000442400
Transcript ID Colon Heart Kidney
ENST00000442400 14.462±0.00 4.684±0.00 7.080±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178015 Pum2-202 protein_coding Mus_musculus 0 1450
ENSMUST00000020915 Pum2-003 protein_coding Mus_musculus 0 1450
ENSMUST00000111123 Pum2-002 protein_coding Mus_musculus 0 1450
ENSMUST00000168361 Pum2-201 protein_coding Mus_musculus 0 1445
ENSMUST00000169089 Pum2-005 protein_coding Mus_musculus 0 1445
ENSMUST00000163569 Pum2-006 protein_coding Mus_musculus 0 1445
ENSMUST00000111122 Pum2-001 protein_coding Mus_musculus 0 1445
ENSMUST00000165293 Pum2-004 nonsense_mediated_decay Mus_musculus 0 1321
ENSMUST00000169750 Pum2-009 protein_coding Mus_musculus 0 1301
ENSMUST00000170037 Pum2-007 nonsense_mediated_decay Mus_musculus 0 1280
ENSMUST00000163730 Pum2-014 protein_coding Mus_musculus 0 961
ENSMUST00000171418 Pum2-011 protein_coding Mus_musculus 0 706
ENSMUST00000166965 Pum2-010 protein_coding Mus_musculus 0 593
ENSMUST00000169177 Pum2-008 processed_transcript Mus_musculus 0 324

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