C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phenylalanyl-tRNA synthetase, beta subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170217 Farsb-002 ENSMUSG00000026245 10090 - 1:78417975-78488859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000170217
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000170217 3.951±1.57 1.708±0.40 3.154±0.00 2.614±0.86 15.457±0.79 2.193±0.00 6.947±0.88 9.773±0.70 6.466±2.20 6.963±2.95 4.794±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LF CIL_0008LF_0002 VISTA 1:77884098-78485294
CIL_000464 CIL_000464_0002 CGP 1:78101267-78420289
CIL_00041I CIL_00041I_0003 CGP 1:78310345-78488897

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003723 IEA RNA binding
GO:0004826 IEA phenylalanine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006432 IEA phenylalanyl-tRNA aminoacylation
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281828 FARSB-001 protein_coding Homo_sapiens 0 2039
ENST00000435808 FARSBP1-001 processed_pseudogene Homo_sapiens 0 1077

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