C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171106 Hnrnpd-006 ENSMUSG00000000568 10090 - 5:99961003-99976551 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000171106
Transcript ID Ovary
ENSMUST00000171106 22.909±0.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0043488 IMP regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313899 HNRNPD-001 protein_coding Homo_sapiens 0 948
ENST00000352301 HNRNPD-003 protein_coding Homo_sapiens 0 920
ENST00000353341 HNRNPD-002 protein_coding Homo_sapiens 0 1110
ENST00000503822 HNRNPD-007 protein_coding Homo_sapiens 0 407
ENST00000507010 HNRNPD-008 protein_coding Homo_sapiens 0 656
ENST00000508119 HNRNPD-012 processed_transcript Homo_sapiens 0 436
ENST00000509107 HNRNPD-009 protein_coding Homo_sapiens 0 257
ENST00000509263 HNRNPD-011 protein_coding Homo_sapiens 0 948
ENST00000513584 HNRNPD-004 nonsense_mediated_decay Homo_sapiens 0 616
ENST00000514325 HNRNPD-006 retained_intron Homo_sapiens 0 536
ENST00000514671 HNRNPD-005 nonsense_mediated_decay Homo_sapiens 0 1801
ENST00000515432 HNRNPD-010 protein_coding Homo_sapiens 0 568

Loading