C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 102, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171143 Fam102b-201 ENSMUSG00000040339 10090 - 3:108970997-109027607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171143 5.508±2.39 0.373±0.19 3.260±0.77 2.101±0.55 1.626±0.49 2.138±1.01 1.215±0.37 2.004±0.50 0.321±0.23 2.371±0.73 0.684±0.34 1.211±0.31 2.900±1.90 0.116±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EQ CIL_0007EQ_0002 CGP 3:108940084-109027607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355086 SRGAP1-001 protein_coding Homo_sapiens 0.00000005 68
ENST00000370035 FAM102B-001 protein_coding Homo_sapiens 0 1358
ENST00000376649 PUS1-001 protein_coding Homo_sapiens 0.00002 57
ENST00000397802 POLR3D-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000405454 FAM102B-003 protein_coding Homo_sapiens 0 1358
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0.000007 58
ENST00000483371 FAM102B-002 retained_intron Homo_sapiens 1e-35 158
ENST00000493357 MIER1-005 processed_transcript Homo_sapiens 0.00000001 64
ENST00000504295 COPB2-003 retained_intron Homo_sapiens 0.000005 58

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