C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-antigen; retina and pineal gland (arrestin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469222 SAG-006 ENSG00000130561 9606 + 2:233327949-233346191 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000469222
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000469222 0.102±0.00 0.216±0.00 0.242±0.00 0.132±0.00 0.067±0.00 0.042±0.00 0.190±0.00 0.029±0.00 0.062±0.00 0.044±0.00 0.018±0.01 0.379±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L2 CIL_0004L2_0002 CGP 2:233210051-233347055
CIL_0003RA CIL_0003RA_0001 CGP 2:233307816-233472104

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177757 Sag-201 protein_coding Mus_musculus 0 680
ENSMUST00000077772 Sag-001 protein_coding Mus_musculus 0 680
ENSMUST00000155393 Sag-004 retained_intron Mus_musculus 0 582
ENSMUST00000128761 Sag-003 retained_intron Mus_musculus 0 483
ENSMUST00000130886 Sag-002 retained_intron Mus_musculus 0 248
ENSMUST00000136708 Sag-007 processed_transcript Mus_musculus 0 217
ENSMUST00000144334 Sag-008 processed_transcript Mus_musculus 0 211
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 0.0000000009 71
ENSMUST00000057256 6030458C11Rik-201 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.0000005 62
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.0000005 62
ENSMUST00000171143 Fam102b-201 protein_coding Mus_musculus 0.000007 58
ENSMUST00000046924 Fam102b-001 protein_coding Mus_musculus 0.000007 58
ENSMUST00000021800 Mcur1-201 protein_coding Mus_musculus 0.00009 55
ENSMUST00000091246 Flcn-005 protein_coding Mus_musculus 0.0003 53
ENSMUST00000148151 Flcn-003 retained_intron Mus_musculus 0.0003 53
ENSMUST00000102697 Flcn-004 protein_coding Mus_musculus 0.0003 53
ENSMUST00000092566 Slc16a10-201 protein_coding Mus_musculus 0.0003 53

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