C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171640 Hnrnpd-010 ENSMUSG00000000568 10090 - 5:99961151-99966174 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000171640
Transcript ID Ovary Placenta Testis
ENSMUST00000171640 36.083±1.78 55.446±21.33 21.181±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0043488 IMP regulation of mRNA stability

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313899 HNRNPD-001 protein_coding Homo_sapiens 0 597
ENST00000352301 HNRNPD-003 protein_coding Homo_sapiens 0 597
ENST00000353341 HNRNPD-002 protein_coding Homo_sapiens 0 760
ENST00000507010 HNRNPD-008 protein_coding Homo_sapiens 0 305
ENST00000508119 HNRNPD-012 processed_transcript Homo_sapiens 0 436
ENST00000509263 HNRNPD-011 protein_coding Homo_sapiens 0 597
ENST00000513584 HNRNPD-004 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000514325 HNRNPD-006 retained_intron Homo_sapiens 0 363
ENST00000514671 HNRNPD-005 nonsense_mediated_decay Homo_sapiens 0 894
ENST00000515432 HNRNPD-010 protein_coding Homo_sapiens 0 248

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