C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxisome proliferator activated receptor gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171644 Pparg-202 ENSMUSG00000000440 10090 + 6:115361221-115490401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000171644
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000171644 18.459±1.67 0.183±0.15 6.444±2.33 1.637±0.69 0.946±0.15 1.844±1.37 1.346±0.21 0.611±0.33 6.070±4.71 59.644±23.47 0.570±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZK CIL_0001ZK_0002 CGP 6:115245616-115490401
CIL_0004K9 CIL_0004K9_0002 CGP 6:115361221-115578350

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287820 PPARG-002 protein_coding Homo_sapiens 0 2132
ENST00000309576 PPARG-007 protein_coding Homo_sapiens 0 2135
ENST00000396999 PPARG-014 nonsense_mediated_decay Homo_sapiens 0 911
ENST00000397000 PPARG-009 protein_coding Homo_sapiens 0 1026
ENST00000397010 PPARG-003 protein_coding Homo_sapiens 0 2135
ENST00000397012 PPARG-001 protein_coding Homo_sapiens 0 2135
ENST00000397015 PPARG-013 protein_coding Homo_sapiens 0 2078
ENST00000397023 PPARG-011 nonsense_mediated_decay Homo_sapiens 0 2130
ENST00000397026 PPARG-005 protein_coding Homo_sapiens 0 2126
ENST00000397029 PPARG-015 protein_coding Homo_sapiens 0 499
ENST00000438682 PPARG-017 protein_coding Homo_sapiens 0 383
ENST00000455517 PPARG-004 protein_coding Homo_sapiens 4.99983e-42 174
ENST00000477039 PPARG-012 retained_intron Homo_sapiens 0 1020
ENST00000497594 PPARG-008 retained_intron Homo_sapiens 0 1026

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