C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000171976 Srsf1-007 ENSMUSG00000018379 10090 + 11:88047725-88048826 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryENSMUST00000171976
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000171976 36.972±12.30 97.327±47.95 38.244±11.80 21.210±5.12 18.387±1.98 7.698±1.16 20.752±0.00 34.142±9.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DL CIL_0009DL_0002 VISTA 11:87880548-88481652
CIL_0009DM CIL_0009DM_0002 VISTA 11:87974079-88576075
CIL_00039M CIL_00039M_0002 CGP 11:87979525-88053755

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258962 SRSF1-001 protein_coding Homo_sapiens 0 523
ENST00000578430 SRSF1-007 retained_intron Homo_sapiens 0 532
ENST00000581979 SRSF1-004 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000582730 SRSF1-003 protein_coding Homo_sapiens 0 523
ENST00000583741 SRSF1-005 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000584773 SRSF1-002 protein_coding Homo_sapiens 0 523
ENST00000585096 SRSF1-006 protein_coding Homo_sapiens 0 329

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