C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: valyl-tRNA synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428445 VARS-006 ENSG00000204394 9606 - 6:31780455-31782589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyTestisENST00000428445
Transcript ID Brain Kidney Testis
ENST00000428445 9.057±0.00 12.331±0.00 24.965±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0004812 IEA aminoacyl-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0006418 IEA tRNA aminoacylation for protein translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173584 Vars-001 protein_coding Mus_musculus 0 894
ENSMUST00000087315 Vars-002 protein_coding Mus_musculus 0 894
ENSMUST00000172637 Vars-003 retained_intron Mus_musculus 0 601
ENSMUST00000172999 Vars-008 retained_intron Mus_musculus 0 268
ENSMUST00000173336 Vars-014 retained_intron Mus_musculus 0 219

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