| Transcript ID | Breast |
|---|---|
| ENSMUST00000172754 | 0.286±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | MDS1 and EVI1 complex locus | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000172754  |
Mecom-002 |
ENSMUSG00000027684 |
10090 | - |
3:29977344-30548008  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000711 | CIL_000711_0002 | CGP | 3:29082023-30548008 |
| CIL_0008SS | CIL_0008SS_0002 | VISTA | 3:29679822-30280970 |
| CIL_000921 | CIL_000921_0002 | VISTA | 3:29804532-30409280 |
| CIL_0007J8 | CIL_0007J8_0002 | UCNEbase | 3:29834894-30452898 |
| CIL_0001ZH | CIL_0001ZH_0002 | CGP | 3:29951299-30599939 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001701 | IMP | in utero embryonic development |
| GO:0001780 | IMP | neutrophil homeostasis |
| GO:0003677 | IDA | DNA binding |
| GO:0006954 | IMP | inflammatory response |
| GO:0009617 | IMP | response to bacterium |
| GO:0009791 | IMP | post-embryonic development |
| GO:0030900 | IMP | forebrain development |
| GO:0035115 | IMP | embryonic forelimb morphogenesis |
| GO:0035116 | IMP | embryonic hindlimb morphogenesis |
| GO:0042127 | IMP | regulation of cell proliferation |
| GO:0045944 | IDA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0060039 | IMP | pericardium development |
| GO:0072001 | IGI | renal system development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000264674
|
MECOM-201 | protein_coding | Homo_sapiens | 0 | 2612 |
|
ENST00000433243
|
MECOM-016 | protein_coding | Homo_sapiens | 0 | 2612 |
|
ENST00000460814
|
MECOM-017 | protein_coding | Homo_sapiens | 0 | 2591 |
|
ENST00000460890
|
MECOM-011 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000461430
|
MECOM-014 | retained_intron | Homo_sapiens | 0 | 405 |
|
ENST00000464456
|
MECOM-020 | protein_coding | Homo_sapiens | 0 | 2591 |
|
ENST00000468789
|
MECOM-018 | protein_coding | Homo_sapiens | 0 | 2591 |
|
ENST00000472280
|
MECOM-019 | protein_coding | Homo_sapiens | 0 | 2612 |
|
ENST00000475754
|
MECOM-008 | protein_coding | Homo_sapiens | 0 | 219 |
|
ENST00000481315
|
MECOM-007 | protein_coding | Homo_sapiens | 0 | 311 |
|
ENST00000484519
|
MECOM-012 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000485957
|
MECOM-001 | processed_transcript | Homo_sapiens | 0 | 385 |
|
ENST00000486748
|
MECOM-005 | protein_coding | Homo_sapiens | 0 | 307 |
|
ENST00000487503
|
MECOM-010 | protein_coding | Homo_sapiens | 0 | 309 |
|
ENST00000492586
|
MECOM-015 | protein_coding | Homo_sapiens | 0 | 529 |
|
ENST00000494292
|
MECOM-004 | protein_coding | Homo_sapiens | 0 | 2591 |
|
ENST00000494597
|
MECOM-009 | protein_coding | Homo_sapiens | 0 | 309 |
