C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cordon-bleu WH2 repeat
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000172827 Cobl-010 ENSMUSG00000020173 10090 - 11:12267007-12369692 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000172827
Transcript ID Testis
ENSMUST00000172827 0.585±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KL CIL_0008KL_0002 VISTA 11:11661856-12262621
CIL_00072I CIL_00072I_0003 CGP 11:11930508-12464960

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IGI neural tube closure

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265136 COBL-001 protein_coding Homo_sapiens 7e-31 141
ENST00000395540 COBL-006 protein_coding Homo_sapiens 3e-31 141
ENST00000395542 COBL-201 protein_coding Homo_sapiens 7e-31 141
ENST00000431948 COBL-003 protein_coding Homo_sapiens 0 425
ENST00000441453 COBL-005 protein_coding Homo_sapiens 5e-31 141
ENST00000445054 COBL-002 protein_coding Homo_sapiens 0 473
ENST00000452534 COBL-004 protein_coding Homo_sapiens 2e-31 141

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