C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cordon-bleu WH2 repeat protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431948 COBL-003 ENSG00000106078 9606 - 7:51016212-51190943 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryTestisENST00000431948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Testis
ENST00000431948 0.514±0.00 0.070±0.00 0.833±0.00 4.170±0.00 0.407±0.00 2.275±1.22 1.639±0.44 2.210±0.00 1.492±0.00 1.490±0.00 1.464±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072I CIL_00072I_0002 CGP 7:50590063-51316818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174874 Cobl-008 protein_coding Mus_musculus 0 1059
ENSMUST00000046755 Cobl-001 protein_coding Mus_musculus 0 1059
ENSMUST00000109651 Cobl-006 protein_coding Mus_musculus 0 771
ENSMUST00000130572 Cobl-002 retained_intron Mus_musculus 0 750
ENSMUST00000172956 Cobl-007 nonsense_mediated_decay Mus_musculus 0 553
ENSMUST00000109650 Cobl-003 protein_coding Mus_musculus 0 553
ENSMUST00000172919 Cobl-009 protein_coding Mus_musculus 0 427
ENSMUST00000172827 Cobl-010 protein_coding Mus_musculus 0 425
ENSMUST00000146067 Cobl-005 protein_coding Mus_musculus 0 228

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