C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cordon-bleu WH2 repeat protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445054 COBL-002 ENSG00000106078 9606 - 7:51016212-51193435 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverLungOvaryPlacentaTestisENST00000445054
Transcript ID Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000445054 4.353±1.19 0.866±0.00 3.146±0.36 1.742±0.00 1.461±0.39 1.100±0.00 0.628±0.19 0.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072I CIL_00072I_0002 CGP 7:50590063-51316818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130572 Cobl-002 retained_intron Mus_musculus 0 713
ENSMUST00000174874 Cobl-008 protein_coding Mus_musculus 0 713
ENSMUST00000046755 Cobl-001 protein_coding Mus_musculus 0 713
ENSMUST00000172919 Cobl-009 protein_coding Mus_musculus 0 599
ENSMUST00000172827 Cobl-010 protein_coding Mus_musculus 0 473
ENSMUST00000172956 Cobl-007 nonsense_mediated_decay Mus_musculus 0 429
ENSMUST00000109651 Cobl-006 protein_coding Mus_musculus 0 429
ENSMUST00000109650 Cobl-003 protein_coding Mus_musculus 0 429
ENSMUST00000146067 Cobl-005 protein_coding Mus_musculus 0 291

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