C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173078 Otud4-001 ENSMUSG00000036990 10090 + 8:79639618-79677724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173078
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173078 5.327±2.79 7.937±3.56 6.825±0.71 4.367±1.18 5.363±1.55 6.381±2.77 3.040±1.01 2.854±0.81 3.403±1.70 6.282±1.81 4.010±1.29 11.760±5.36 9.625±1.42 6.227±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0002 VISTA 8:79537628-80138676
CIL_0006B8 CIL_0006B8_0002 CGP 8:79639618-79711740

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0044822 IEA poly(A) RNA binding
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237841 OTUD4P1-001 processed_pseudogene Homo_sapiens 0 2004
ENST00000447906 OTUD4-004 protein_coding Homo_sapiens 0 4056
ENST00000454497 OTUD4-001 protein_coding Homo_sapiens 0 4926
ENST00000455611 OTUD4-009 processed_transcript Homo_sapiens 0 2283
ENST00000504501 OTUD4-003 protein_coding Homo_sapiens 0 601
ENST00000505976 OTUD4-005 processed_transcript Homo_sapiens 0 811
ENST00000509620 OTUD4-002 protein_coding Homo_sapiens 0 621
ENST00000509985 OTUD4-008 processed_transcript Homo_sapiens 0 329
ENST00000514973 OTUD4-010 protein_coding Homo_sapiens 0 1325

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