C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic FMR1 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173267 Cyfip1-004 ENSMUSG00000030447 10090 + 7:55897074-55930498 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonTestisENSMUST00000173267
Transcript ID Brain Colon Testis
ENSMUST00000173267 2.087±0.26 5.112±0.96 0.423±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L9 CIL_0006L9_0002 CGP 7:55794148-55930700
CIL_0003A6 CIL_0003A6_0002 CGP 7:55841745-55962476

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000149396 cyfip2-001 protein_coding Danio_rerio 0 1182
ENSDART00000020014 cyfip2-201 protein_coding Danio_rerio 0 1173
ENSDART00000123607 cyfip2-202 protein_coding Danio_rerio 0 1173
ENSDART00000065127 cyfip1-001 protein_coding Danio_rerio 0 1138
ENSDART00000104233 cyfip1-201 protein_coding Danio_rerio 0 1136
ENSDART00000147898 cyfip1-003 processed_transcript Danio_rerio 0 279
ENST00000435847 CYFIP2-006 protein_coding Homo_sapiens 0 1105
ENST00000519663 CYFIP2-011 retained_intron Homo_sapiens 0 407
ENST00000521420 CYFIP2-001 protein_coding Homo_sapiens 0 1105
ENST00000522463 CYFIP2-007 protein_coding Homo_sapiens 0 1105
ENST00000522892 CYFIP2-021 retained_intron Homo_sapiens 0 195
ENST00000523383 CYFIP2-022 retained_intron Homo_sapiens 0 407
ENST00000541131 CYFIP2-201 protein_coding Homo_sapiens 0 1105
ENST00000557890 CYFIP1-014 retained_intron Homo_sapiens 0 281
ENST00000561263 CYFIP1-015 protein_coding Homo_sapiens 0 682
ENST00000610365 CYFIP1-003 protein_coding Homo_sapiens 0 2569
ENST00000616178 CYFIP2-003 protein_coding Homo_sapiens 0 1105
ENST00000617556 CYFIP1-004 protein_coding Homo_sapiens 0 2569
ENST00000617928 CYFIP1-001 protein_coding Homo_sapiens 0 2569
ENST00000618329 CYFIP2-002 protein_coding Homo_sapiens 0 1105
ENST00000619290 CYFIP1-022 retained_intron Homo_sapiens 0 911
ENST00000619348 CYFIP1-005 retained_intron Homo_sapiens 0 1827
ENST00000620254 CYFIP2-008 protein_coding Homo_sapiens 0 1105
ENST00000620969 CYFIP2-202 protein_coding Homo_sapiens 0 785
ENST00000621105 CYFIP1-023 retained_intron Homo_sapiens 0 494
ENST00000622576 CYFIP1-021 nonsense_mediated_decay Homo_sapiens 0 265

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