C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173286 Otud4-002 ENSMUSG00000036990 10090 + 8:79639704-79677672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000173286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000173286 5.670±1.67 8.990±2.41 5.739±0.85 4.824±0.98 8.873±2.54 6.309±1.78 6.126±0.97 4.490±1.72 4.166±1.14 8.467±2.86 3.168±1.53 7.236±3.18 8.947±1.08 12.023±3.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0002 VISTA 8:79537628-80138676
CIL_0006B8 CIL_0006B8_0002 CGP 8:79639618-79711740

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237841 OTUD4P1-001 processed_pseudogene Homo_sapiens 0 2004
ENST00000447906 OTUD4-004 protein_coding Homo_sapiens 0 4063
ENST00000454497 OTUD4-001 protein_coding Homo_sapiens 0 4933
ENST00000455611 OTUD4-009 processed_transcript Homo_sapiens 0 2292
ENST00000504501 OTUD4-003 protein_coding Homo_sapiens 0 601
ENST00000505976 OTUD4-005 processed_transcript Homo_sapiens 0 811
ENST00000509620 OTUD4-002 protein_coding Homo_sapiens 0 621
ENST00000509985 OTUD4-008 processed_transcript Homo_sapiens 0 329
ENST00000514973 OTUD4-010 protein_coding Homo_sapiens 0 1332

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